PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000757476
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 45aa    MW: 4930.78 Da    PI: 10.0841
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000757476genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.81.4e-20138137
                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS
           WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37
                   ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+
  MDP0000757476  1 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQ 38
                   58***************************99******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.6E-12144IPR003657WRKY domain
PROSITE profilePS5081119.416138IPR003657WRKY domain
SuperFamilySSF1182901.83E-17138IPR003657WRKY domain
PfamPF031065.9E-18238IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-18238IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 45 aa     Download sequence    Send to blast
MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA AGCPVRKQGL NLTI*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4727691e-34AM472769.2 Vitis vinifera contig VV78X277460.7, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643469.12e-23PREDICTED: probable WRKY transcription factor 72 isoform X2
RefseqXP_015943356.11e-23PREDICTED: probable WRKY transcription factor 9 isoform X1
RefseqXP_015943357.11e-23PREDICTED: probable WRKY transcription factor 9 isoform X2
RefseqXP_016179274.12e-23PREDICTED: probable WRKY transcription factor 9 isoform X1
RefseqXP_016179275.12e-23PREDICTED: probable WRKY transcription factor 9 isoform X2
SwissprotQ8VWV61e-24WRK61_ARATH; Probable WRKY transcription factor 61
TrEMBLA0A078DE558e-24A0A078DE55_BRANA; BnaA02g02500D protein
TrEMBLA0A0E0DWS81e-23A0A0E0DWS8_9ORYZ; Uncharacterized protein
STRINGBGIOSGA022298-PA8e-23(Oryza sativa Indica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.17e-26WRKY DNA-binding protein 61